Analysis of the potential mechanism underlying the unfavorable prognosis of colon cancer associated with elevated fibroblast activation protein expression
作者:申瑜峥1,严黛君1,常帅1,赵轶峰2
单位:1. 河北北方学院研究生院,河北 张家口 075000
2. 河北北方学院附属第一医院胃肠肿瘤外科,河北 张家口 075000
Authors: Shen Yuzheng1, Yan Daijun1, Chang Shuai1, Zhao Yifeng2
Unit:1.Graduate
College, Hebei North University, Zhangjiakou 075000, Hebei, China;2.Department of Gastrointestinal Tumor Surgery, the First Affiliated
Hospital of Hebei North University, Zhangjiakou 075000, Hebei, China
摘要:
目的 分析成纤维细胞活化蛋白(fibroblast activation
protein, FAP)基因在结肠癌中的表达情况,并探究其表达与结肠癌患者预后的相关性及潜在机制,为结肠癌的发病机制、诊断、治疗及预后提供新思路。方法
下载基因表达综合数据库和癌症基因组图谱数据库中结肠癌组织样本和癌旁正常组织样本的表达数据,分析FAP基因在结肠癌组织样本和癌旁正常组织样本中的表达情况。对Kaplan-Meier plotter数据库中结肠癌患者的生存资料进行生存分析,探究FAP基因表达与患者总生存率的相关性。使用GEPIA2数据库分析FAP基因在结肠癌患者中的表达及其对预后的作用。下载基因表达综合数据库和癌症基因组图谱数据库中结肠癌的临床相关数据,分析FAP基因在不同临床分期中的表达情况。通过基因集富集分析探索FAP基因与结肠癌发生、发展相关的分子作用通路。免疫相关性分析(CIBERSORT)用于探索FAP基因与免疫细胞浸润、免疫检查点表达的相关性。结果
FAP基因在结肠癌组织中的表达较癌旁正常组织上调(P﹤0.05)。结肠癌患者中FAP基因的表达水平在不同分期之间存在差异(P﹤0.05)。生存分析结果显示,高表达FAP基因患者的总生存率低于低表达FAP基因患者(P﹤0.05)。FAP基因通过多种通路影响结肠癌的发生发展。在结肠癌中,FAP基因与CD4+记忆T 细胞、浆细胞的浸润水平呈负相关,与常见免疫检查点表达呈正相关。结论 FAP基因在结肠癌中高表达,与患者不良预后显著相关。此外,FAP基因可通过多种细胞功能、化学通路以及免疫浸润等方式促进肿瘤的进展,是治疗结肠癌的潜在靶点。
关键词: 成纤维细胞活化蛋白;结肠癌;标志物;生物信息
Abstract:
Objective The objective of this study is
to investigate the expression pattern of the fibroblast activation protein (FAP)
gene in colon cancer and assess its association with patients’ clinical characteristics
and prognosis, aiming to provide novel insights into the pathogenesis,
diagnosis, treatment, and prognosis of colon cancer. Method The RNA
sequencing data of colon cancer tissues and adjacent normal tissues were
downloaded from the gene expression omnibus database and the cancer gene atlas
database. The expression level of FAP gene in adjacent normal tissues
and colon cancer tissues was analyzed. Survival analysis was performed using
colon cancer patients’ survival data from Kaplan-Meier plotter database to examine
the relationship between FAP gene expression and overall survival rate.
Furthermore, GEPIA2 database was utilized to assess FAP gene expression
in colon cancer and its prognostic predictive effect. The clinical data of
colon cancer were downloaded from the gene expression omnibus database and the
cancer gene atlas database to explore the expression pattern of FAP gene
in different stages. To investigate molecular pathways associated with the
occurrence and development of colon cancer related to FAP gene, gene enrichment
analysis was conducted. Immuno-correlation analysis (CIBERSORT) was employed to
explore the association between FAP gene and immune cell infiltration
and immune checkpoint expression. Result Compared to adjacent normal
tissues, the expression of FAP gene was upregulated in colon cancer
tissues(P﹤0.05). The expression level of FAP
gene was different among different stages in colon cancer patients(P﹤0.05). Survival analysis results demonstrated that patients with
high FAP gene expression had a lower overall survival rate than those
with low FAP gene expression (P﹤0.05).
Furthermore, FAP gene influences the occurrence and progression of colon
cancer through various pathways. In colon cancer specifically, FAP gene
had a negative correlation with the infiltration levels of CD4+
memory T cells and plasma cells, and a positive correlation with the expression
levels of common immune checkpoints. Conclusion The expression of FAP
gene is upregulated in colon cancer and is strongly associated with unfavorable
survival outcomes and prognosis. FAP gene plays a crucial role in
promoting tumor progression through diverse cellular functions, chemical pathways,
and immune infiltration, thereby establishing itself as a promising therapeutic
target for the treatment of colon cancer.
Key Words: Fibroblast
activating protein; Colon cancer; Biomarker; Bioinformation
注:网络优先发布
上一篇:2024年第16卷第3期 目录
下一篇:暂无下一篇
关注我们